Sequence Similarity Clusters for the Entities in PDB 4EC5

Entity #1 | Chains: A,B
General secretion pathway protein D protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 38799
95 % 2 2 17927 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 2 2 17559
70 % 2 2 16296
50 % 2 2 14202
40 % 2 2 12688
30 % 2 2 10880

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.