Sequence Similarity Clusters for the Entities in PDB 4EC5

Entity #1 | Chains: A,B
General secretion pathway protein D protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 39668
95 % 2 4 9345 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 2 4 9252
70 % 2 4 8867
50 % 2 4 8037
40 % 2 4 7396
30 % 2 4 6527

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures