Sequence Similarity Clusters for the Entities in PDB 4EAF

Entity #1 | Chains: A
Thymidine phosphorylase protein, length: 440 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 8160
95 % 3 12 3523 Flexibility: Low
Max RMSD: 1.7, Avg RMSD: 1.0
PDBFlex
90 % 3 12 3575
70 % 3 12 3534
50 % 3 12 3434
40 % 3 20 1619
30 % 3 21 1498

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4EAD 1 A Thymidine phosphorylase 562 2.4.2.4 | Details
2 4LHM 1 A Thymidine phosphorylase 562 2.4.2.4 | Details
3 4EAF 1 A Thymidine phosphorylase 562 2.4.2.4 | Details
4 2DSJ 1 A, B Pyrimidine-nucleoside (Thymidine) phosphorylase 274 2.4.2.2 | Details
5 3H5Q 1 A Pyrimidine-nucleoside phosphorylase 1280 2.4.2.2 | Details
6 5EY3 1 A, B Thymidine phosphorylase The A chain contains two residues of the thrombine restriction site (Gly and Ser). In the B chain we could not localize those residues due to poor electron density map of the N-terminal residues. 28901 2.4.2.4 | Details
7 1UOU 1 A THYMIDINE PHOSPHORYLASE RESIDUES 12-408,411-482 9606 2.4.2.4 | Details
8 4X46 1 A, B Thymidine phosphorylase 28901 2.4.2.4 | Details
9 4XR5 1 A, B Thymidine phosphorylase 28901 2.4.2.4 | Details
10 1BRW 1 A, B PROTEIN (PYRIMIDINE NUCLEOSIDE PHOSPHORYLASE) 1422 2.4.2.2 | Details
11 4YEK 1 A, B Thymidine phosphorylase 28901 2.4.2.4 | Details
12 4YYY 1 A, B Thymidine phosphorylase 28901 2.4.2.4 | Details
13 2J0F 1 A, B, C, D THYMIDINE PHOSPHORYLASE 9606 2.4.2.4 | Details
14 2TPT 1 A THYMIDINE PHOSPHORYLASE TETRAGONAL CRYSTAL FORM 562 2.4.2.4 | Details
15 2WK6 1 A, B THYMIDINE PHOSPHORYLASE 9606 2.4.2.4 | Details
16 5EP8 1 A, B Pyrimidine-nucleoside phosphorylase 1423 2.4.2.2 | Details
17 1OTP 1 A THYMIDINE PHOSPHORYLASE 562 2.4.2.4 | Details
18 1AZY 1 A, B THYMIDINE PHOSPHORYLASE MONOCLINIC CRYSTAL FORM 562 2.4.2.4 | Details
19 2WK5 1 A, B, C, D THYMIDINE PHOSPHORYLASE 9606 2.4.2.4 | Details
20 1TPT 1 A THYMIDINE PHOSPHORYLASE 562 2.4.2.4 | Details
21 4GA4 1 A, B Putative thymidine phosphorylase UNP residues 85-503 311400 1.13.11.53 | Details 2.4.2.57 | Details