Sequence Similarity Clusters for the Entities in PDB 4E9J

Entity #1 | Chains: A,B
General secretion pathway protein D protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 13166
95 % 1 4 9486 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 1 4 9391
70 % 1 4 8988
50 % 1 4 8143
40 % 1 4 7490
30 % 1 4 6607

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures