Sequence Similarity Clusters for the Entities in PDB 4E9J

Entity #1 | Chains: A,B
General secretion pathway protein D protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 37930
95 % 1 2 17485 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.3
PDBFlex
90 % 1 2 17120
70 % 1 2 15919
50 % 1 2 13885
40 % 1 2 12407
30 % 1 2 10631

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.