Sequence Similarity Clusters for the Entities in PDB 4E5X

Entity #1 | Chains: A,D
HLA class I histocompatibility antigen, A-2 alpha chain protein, length: 275 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 63 162 50
95 % 91 210 58
90 % 101 246 34
70 % 244 594 7
50 % 244 599 7
40 % 255 639 11
30 % 274 752 13
Entity #2 | Chains: B,E
Beta-2-microglobulin protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 226 511 2
95 % 247 549 3
90 % 249 558 3
70 % 296 780 5
50 % 299 798 5
40 % 299 798 9
30 % 299 798 11
Entity #3 | Chains: C,F
Protein Tax-1 protein, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #4 | Chains: G,H
Early E3 18.5 kDa glycoprotein protein, length: 100 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40946
95 % 1 1 30653
90 % 1 1 29373
70 % 1 1 26289
50 % 1 1 22585
40 % 1 1 19952
30 % 1 1 16896

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.