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An Information Portal to 105212 Biological Macromolecular Structures

Anophelin from the malaria vector inhibits thrombin through a novel reverse-binding mechanism
Sequence Clustering and Redundancy Reduction Results
4E06
Sequence Clusters for the Sequence Entities in PDB 4E06
Entity #1: Chains: L - Thrombin protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 289 305 13
95% 290 306 20
90% 290 306 24
70% 291 308 32
50% 291 308 47
40% 291 308 64
30% 291 308 88
Entity #2: Chains: H - Thrombin protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 250 262 17
95% 325 343 18
90% 330 350 19
70% 348 374 22
50% 348 374 27
40% 1397 1470 3
30% 1509 1592 5
Entity #3: Chains: I - Salivary anti-thrombin peptide anophelin protein, length: 61 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 2 2 37122
95% 2 2 27981
90% 2 2 26902
70% 2 2 24263
50% 2 2 20989
40% 2 2 18647
30% 2 2 15895
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.