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An Information Portal to 106082 Biological Macromolecular Structures

Anophelin from the malaria vector inhibits thrombin through a novel reverse-binding mechanism
Sequence Clustering and Redundancy Reduction Results
4E05
Sequence Clusters for the Sequence Entities in PDB 4E05
Entity #1: Chains: L - Thrombin protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 212 305 13
95% 212 306 21
90% 212 306 25
70% 212 308 34
50% 212 308 48
40% 212 308 65
30% 212 308 88
Entity #2: Chains: H - Thrombin protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 189 262 19
95% 237 343 18
90% 240 350 19
70% 245 374 22
50% 245 374 28
40% 1076 1475 3
30% 1160 1599 5
Entity #3: Chains: I - Salivary anti-thrombin peptide anophelin protein, length: 61 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 2 37682
95% 1 2 28360
90% 1 2 27258
70% 1 2 24575
50% 1 2 21241
40% 1 2 18859
30% 1 2 16073
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.