Sequence Similarity Clusters for the Entities in PDB 4DXI

Entity #1 | Chains: A,B,C,D
GREEN FLUORESCENT PROTEIN protein, length: 231 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21038
95 % 3 7 4181 Flexibility: No
Max RMSD: 0.9, Avg RMSD: 0.4
PDBFlex
90 % 3 7 4211
70 % 13 77 97
50 % 37 194 18
40 % 39 200 24
30 % 166 516 17

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures