Sequence Similarity Clusters for the Entities in PDB 4DXA

Entity #1 | Chains: A
Ras-related protein Rap-1b protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65695
95 % 8 21 1890 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 8 21 1930
70 % 8 21 1950
50 % 161 294 99
40 % 229 492 23
30 % 314 837 14
Entity #2 | Chains: B
Krev interaction trapped protein 1 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 17258
95 % 2 4 15996 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.9
PDBFlex
90 % 2 4 15666
70 % 2 4 14644
50 % 2 4 12913
40 % 2 4 11578
30 % 2 4 9834

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures