Sequence Similarity Clusters for the Entities in PDB 4DXA

Entity #1 | Chains: A
Ras-related protein Rap-1b protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61802
95 % 8 19 2776 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.8
PDBFlex
90 % 8 19 2819
70 % 8 19 2786
50 % 138 250 122
40 % 203 436 28
30 % 284 768 16
Entity #2 | Chains: B
Krev interaction trapped protein 1 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 54181
95 % 2 4 13714 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.9
PDBFlex
90 % 2 4 13489
70 % 2 4 12676
50 % 2 4 11286
40 % 2 4 10234
30 % 2 4 8904

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.