Sequence Similarity Clusters for the Entities in PDB 4DXA

Entity #1 | Chains: A
Ras-related protein Rap-1b protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 44030
95 % 8 21 1844 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 8 21 1884
70 % 8 21 1919
50 % 155 287 97
40 % 221 478 21
30 % 304 817 16
Entity #2 | Chains: B
Krev interaction trapped protein 1 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 56527
95 % 2 4 14342 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.9
PDBFlex
90 % 2 4 14115
70 % 2 4 13278
50 % 2 4 11804
40 % 2 4 10701
30 % 2 4 9321

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures