Sequence Similarity Clusters for the Entities in PDB 4DXA

Entity #1 | Chains: A
Ras-related protein Rap-1b protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61127
95 % 8 19 2735 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 1.9
PDBFlex
90 % 8 19 2781
70 % 8 19 2748
50 % 133 241 129
40 % 198 427 27
30 % 279 758 16
Entity #2 | Chains: B
Krev interaction trapped protein 1 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53553
95 % 2 4 13543
90 % 2 4 13321
70 % 2 4 12529
50 % 2 4 11167
40 % 2 4 10130
30 % 2 4 8805

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.