Sequence Similarity Clusters for the Entities in PDB 4DXA

Entity #1 | Chains: A
Ras-related protein Rap-1b protein, length: 169 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 43310
95 % 8 21 1809 Flexibility: Low
Max RMSD: 3.4, Avg RMSD: 2.0
PDBFlex
90 % 8 21 1845
70 % 8 21 1874
50 % 147 272 103
40 % 213 462 21
30 % 296 797 16
Entity #2 | Chains: B
Krev interaction trapped protein 1 protein, length: 322 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 55670
95 % 2 4 14115 Flexibility: Low
Max RMSD: 1.0, Avg RMSD: 0.9
PDBFlex
90 % 2 4 13889
70 % 2 4 13073
50 % 2 4 11623
40 % 2 4 10539
30 % 2 4 9181

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures