Sequence Similarity Clusters for the Entities in PDB 4DX8

Entity #1 | Chains: A,B,D,E
Integrin beta-1-binding protein 1 protein, length: 154 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 3 1038
95 % 2 3 1419 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 0.9
PDBFlex
90 % 2 3 1446
70 % 2 3 1452
50 % 2 3 1505
40 % 2 3 1525
30 % 2 3 1503
Entity #2 | Chains: H,I,J,K
Krev interaction trapped protein 1 protein, length: 203 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 21042
95 % 1 1 18230 Flexibility: Low
Max RMSD: 1.9, Avg RMSD: 1.2
PDBFlex
90 % 1 1 17763
70 % 1 1 16443
50 % 1 1 14302
40 % 1 1 12737
30 % 1 1 10900

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.