Sequence Similarity Clusters for the Entities in PDB 4DW2

Entity #1 | Chains: U
Urokinase-type plasminogen activator protein, length: 246 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 45 45 795
95 % 109 112 304
90 % 109 112 320
70 % 114 117 340
50 % 114 117 399
40 % 124 128 364
30 % 1786 1833 6
Entity #2 | Chains: H
Fab fragment of pro-uPA antibody mAb-112 protein, length: 212 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 60152
95 % 2 2 22885
90 % 2 2 22144
70 % 1849 2238 2
50 % 3821 4619 1
40 % 3821 4619 1
30 % 4511 5440 1
Entity #3 | Chains: L
Fab fragment of pro-uPA antibody mAb-112 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 27393
95 % 13 20 2763
90 % 96 145 141
70 % 1883 2280 1
50 % 3822 4619 1
40 % 3822 4619 1
30 % 4512 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.