Sequence Similarity Clusters for the Entities in PDB 4DVG

Entity #1 | Chains: A
Rho-like small GTPase protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 16742
95 % 3 3 15544 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 3 3 15214
70 % 3 3 14242
50 % 3 3 12584
40 % 3 3 11292
30 % 617 837 14
Entity #2 | Chains: B
Diaphanous protein protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61615
95 % 1 1 50200
90 % 1 1 47624
70 % 1 1 41713
50 % 1 1 35397
40 % 1 1 31007
30 % 1 1 25917

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures