Sequence Similarity Clusters for the Entities in PDB 4DVG

Entity #1 | Chains: A
Rho-like small GTPase protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 61735
95 % 3 3 14399 Flexibility: Low
Max RMSD: 1.6, Avg RMSD: 1.0
PDBFlex
90 % 3 3 14125
70 % 3 3 13266
50 % 3 3 11795
40 % 3 3 10687
30 % 3 3 9285
Entity #2 | Chains: B
Diaphanous protein protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 53980
95 % 1 1 39082
90 % 1 1 37349
70 % 1 1 33222
50 % 1 1 28405
40 % 1 1 25111
30 % 1 1 21374

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.