Sequence Similarity Clusters for the Entities in PDB 4DVG

Entity #1 | Chains: A
Rho-like small GTPase protein, length: 188 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63496
95 % 3 3 14817 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 3 3 14544
70 % 3 3 13638
50 % 3 3 12117
40 % 3 3 10977
30 % 3 3 9543
Entity #2 | Chains: B
Diaphanous protein protein, length: 353 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 55515
95 % 1 1 40151
90 % 1 1 38332
70 % 1 1 34033
50 % 1 1 29081
40 % 1 1 25695
30 % 1 1 21862

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures