Sequence Similarity Clusters for the Entities in PDB 4DVB

Entity #1 | Chains: A,H
Fab fragment of pro-uPA antibody mAb-112 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 40474
95 % 1 2 22885
90 % 1 2 22144
70 % 552 2238 2
50 % 1141 4619 1
40 % 1141 4619 1
30 % 1266 5440 1
Entity #2 | Chains: B,L
Fab fragment of pro-uPA antibody mAb-112 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 27393
95 % 2 20 2763
90 % 19 145 141
70 % 554 2280 1
50 % 1142 4619 1
40 % 1142 4619 1
30 % 1267 5440 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.