Sequence Similarity Clusters for the Entities in PDB 4DVB

Entity #1 | Chains: A,H
Fab fragment of pro-uPA antibody mAb-112 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 37625
95 % 1 2 21220
90 % 1 2 20554
70 % 503 2016 1
50 % 1041 4166 1
40 % 1041 4167 1
30 % 1140 4915 1
Entity #2 | Chains: B,L
Fab fragment of pro-uPA antibody mAb-112 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25395
95 % 2 20 2553
90 % 19 140 137
70 % 419 1710 2
50 % 1042 4166 1
40 % 1042 4167 1
30 % 1141 4915 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.