Sequence Similarity Clusters for the Entities in PDB 4DVB

Entity #1 | Chains: A,H
Fab fragment of pro-uPA antibody mAb-112 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 35806
95 % 1 2 20224
90 % 1 2 19595
70 % 464 1866 1
50 % 956 3846 1
40 % 957 3847 1
30 % 1053 4574 1
Entity #2 | Chains: B,L
Fab fragment of pro-uPA antibody mAb-112 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 24112
95 % 2 20 2366
90 % 15 136 134
70 % 383 1583 3
50 % 957 3846 1
40 % 958 3847 1
30 % 1054 4574 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.