Sequence Similarity Clusters for the Entities in PDB 4DVB

Entity #1 | Chains: A,H
Fab fragment of pro-uPA antibody mAb-112 protein, length: 213 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 34739
95 % 1 2 19658
90 % 1 2 19041
70 % 439 1782 1
50 % 906 3677 1
40 % 907 3678 1
30 % 994 4338 1
Entity #2 | Chains: B,L
Fab fragment of pro-uPA antibody mAb-112 protein, length: 215 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 23395
95 % 2 20 2289
90 % 15 134 130
70 % 363 1519 3
50 % 907 3677 1
40 % 908 3678 1
30 % 995 4338 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.