Sequence Similarity Clusters for the Entities in PDB 4DV5

Entity #1 | Chains: A
16S rRNA rna, length: 1522 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #10 | Chains: J
ribosomal protein S10 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 267 38
95 % 99 268 54
90 % 99 268 57
70 % 99 268 69
50 % 128 397 27
40 % 128 397 38
30 % 141 496 32
Entity #11 | Chains: K
ribosomal protein S11 protein, length: 129 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 269 36
95 % 99 269 50
90 % 99 269 53
70 % 99 269 64
50 % 122 391 35
40 % 137 495 19
30 % 137 495 33
Entity #12 | Chains: L
ribosomal protein S12 protein, length: 135 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 31 51 483
95 % 99 276 39
90 % 99 276 43
70 % 122 404 22
50 % 122 409 25
40 % 122 409 35
30 % 122 409 55
Entity #13 | Chains: M
ribosomal protein S13 protein, length: 126 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 270 34
95 % 99 270 47
90 % 99 270 51
70 % 99 270 61
50 % 125 396 33
40 % 125 396 45
30 % 138 497 36
Entity #14 | Chains: N
ribosomal protein S14 protein, length: 61 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 268 37
95 % 99 268 55
90 % 99 268 58
70 % 99 270 62
50 % 99 270 90
40 % 99 270 112
30 % 99 270 123
Entity #15 | Chains: O
ribosomal protein S15 protein, length: 89 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 272 30
95 % 103 277 38
90 % 103 277 42
70 % 103 277 53
50 % 129 404 26
40 % 129 407 36
30 % 129 407 56
Entity #16 | Chains: P
ribosomal protein S16 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 264 39
95 % 99 269 52
90 % 99 269 55
70 % 99 269 66
50 % 99 271 89
40 % 99 271 110
30 % 125 392 64
Entity #17 | Chains: Q
ribosomal protein S17 protein, length: 105 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 22 87 245
95 % 99 263 56
90 % 99 267 59
70 % 99 267 70
50 % 99 267 94
40 % 99 267 115
30 % 99 267 127
Entity #18 | Chains: R
ribosomal protein S18 protein, length: 88 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 82 183 56
95 % 89 234 64
90 % 89 234 68
70 % 89 234 80
50 % 89 234 108
40 % 89 234 133
30 % 89 234 141
Entity #19 | Chains: S
ribosomal protein S19 protein, length: 93 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 100 272 29
95 % 100 272 43
90 % 100 272 48
70 % 100 272 58
50 % 123 396 29
40 % 123 399 40
30 % 123 399 57
Entity #2 | Chains: B
ribosomal protein S2 protein, length: 256 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 269 32
95 % 99 270 44
90 % 99 270 49
70 % 99 270 59
50 % 122 390 34
40 % 122 393 44
30 % 122 393 61
Entity #20 | Chains: T
ribosomal protein S20 protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 90 217 51
95 % 99 268 53
90 % 99 268 56
70 % 99 268 68
50 % 99 268 92
40 % 99 268 113
30 % 99 268 124
Entity #21 | Chains: U
ribosomal protein THX protein, length: 27 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 259 43
95 % 99 259 59
90 % 99 259 63
70 % 99 259 75
50 % 99 259 97
40 % 99 259 120
30 % 99 259 130
Entity #3 | Chains: C
ribosomal protein S3 protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 88 233 47
95 % 88 233 65
90 % 88 233 69
70 % 88 233 81
50 % 92 304 84
40 % 92 304 102
30 % 92 304 113
Entity #4 | Chains: D
ribosomal protein S4 protein, length: 209 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 262 40
95 % 99 270 45
90 % 99 270 50
70 % 99 270 60
50 % 122 392 32
40 % 122 395 42
30 % 122 395 60
Entity #5 | Chains: E
ribosomal protein S5 protein, length: 162 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 99 269 35
95 % 99 269 49
90 % 99 269 52
70 % 99 269 63
50 % 123 396 31
40 % 123 396 43
30 % 123 398 59
Entity #6 | Chains: F
ribosomal protein S6 protein, length: 101 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 101 274 27
95 % 107 280 36
90 % 107 280 41
70 % 107 280 52
50 % 107 280 87
40 % 107 280 106
30 % 128 334 90
Entity #7 | Chains: G
ribosomal protein S7 protein, length: 156 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 100 273 28
95 % 100 274 41
90 % 100 274 45
70 % 100 274 56
50 % 123 338 70
40 % 123 341 79
30 % 123 341 91
Entity #8 | Chains: H
ribosomal protein S8 protein, length: 138 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 100 269 33
95 % 100 269 46
90 % 100 273 46
70 % 100 273 57
50 % 125 397 28
40 % 126 401 37
30 % 140 508 30
Entity #9 | Chains: I
ribosomal protein S9 protein, length: 128 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 86 178 68
95 % 99 269 51
90 % 99 269 54
70 % 99 269 65
50 % 122 391 36
40 % 122 391 46
30 % 135 496 35

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.