Sequence Similarity Clusters for the Entities in PDB 4DTH

Entity #1 | Chains: A
VgrG protein protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 10183
95 % 1 8 8552 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 1 8 8490
70 % 1 8 8175
50 % 1 8 7482
40 % 1 8 6944
30 % 1 8 6172

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.