Sequence Similarity Clusters for the Entities in PDB 4DTD

Entity #1 | Chains: A
VgrG protein protein, length: 396 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 7 10566
95 % 7 8 8838 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 0.6
PDBFlex
90 % 7 8 8770
70 % 7 8 8428
50 % 7 8 7712
40 % 7 8 7154
30 % 7 8 6359

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures