Sequence Similarity Clusters for the Entities in PDB 4DSS

Entity #1 | Chains: A
Peroxiredoxin type-2 protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 62847
95 % 3 5 4817 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.2
PDBFlex
90 % 3 5 4837
70 % 3 5 4723
50 % 3 5 4527
40 % 3 5 4308
30 % 23 28 650
Entity #2 | Chains: B
Thioredoxin-2 protein, length: 112 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 46423
95 % 1 4 14920 Flexibility: No
Max RMSD: 0.5, Avg RMSD: 0.4
PDBFlex
90 % 1 4 14646
70 % 3 9 6330
50 % 84 184 130
40 % 94 199 130
30 % 109 235 120

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.