Sequence Similarity Clusters for the Entities in PDB 4DSI

Entity #1 | Chains: A
DNA polymerase protein, length: 581 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 30 46 790
95 % 67 95 290 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.1
PDBFlex
90 % 67 95 302
70 % 67 95 346
50 % 67 95 411
40 % 67 95 435
30 % 67 95 436
Entity #2 | Chains: B
DNA dna, length: 12 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
Entity #3 | Chains: C
Se-dGTP dna, length: 9 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.