Sequence Similarity Clusters for the Entities in PDB 4DRH

Entity #1 | Chains: A,D
Peptidyl-prolyl cis-trans isomerase FKBP5 protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 17738
95 % 4 4 16446 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 4 4 16070
70 % 4 4 14956
50 % 5 8 6504
40 % 5 8 6036
30 % 5 8 5291
Entity #2 | Chains: B,E
Serine/threonine-protein kinase mTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 3538
95 % 8 13 3611 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.7
PDBFlex
90 % 8 13 3674
70 % 8 13 3625
50 % 8 13 3521
40 % 8 13 3377
30 % 8 13 3115

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures