Sequence Similarity Clusters for the Entities in PDB 4DRH

Entity #1 | Chains: A,D
Peptidyl-prolyl cis-trans isomerase FKBP5 protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 16881
95 % 4 4 15671 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 4 4 15338
70 % 4 4 14352
50 % 5 8 6246
40 % 5 8 5803
30 % 5 8 5102
Entity #2 | Chains: B,E
Serine/threonine-protein kinase mTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 3349
95 % 8 13 3448 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.8
PDBFlex
90 % 8 13 3513
70 % 8 13 3455
50 % 8 13 3372
40 % 8 13 3236
30 % 8 13 2999

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures