Sequence Similarity Clusters for the Entities in PDB 4DRH

Entity #1 | Chains: A,D
Peptidyl-prolyl cis-trans isomerase FKBP5 protein, length: 144 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 18107
95 % 4 4 16769 Flexibility: Low
Max RMSD: 1.4, Avg RMSD: 1.1
PDBFlex
90 % 4 4 16381
70 % 4 4 15227
50 % 5 8 6598
40 % 5 8 6124
30 % 5 8 5371
Entity #2 | Chains: B,E
Serine/threonine-protein kinase mTOR protein, length: 98 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 7 12 3629
95 % 8 13 3704 Flexibility: Low
Max RMSD: 2.8, Avg RMSD: 0.7
PDBFlex
90 % 8 13 3758
70 % 8 13 3701
50 % 8 13 3581
40 % 8 13 3435
30 % 8 13 3165

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures