Sequence Similarity Clusters for the Entities in PDB 4DRF

Entity #1 | Chains: A,C
Metallophosphoesterase protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 6286
95 % 3 5 5633 Flexibility: Medium
Max RMSD: 10.4, Avg RMSD: 6.3
PDBFlex
90 % 3 5 5654
70 % 3 5 5561
50 % 3 5 5272
40 % 3 5 4970
30 % 3 5 4534
Entity #2 | Chains: B,D
Methyltransferase type 12 protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 13290
95 % 3 3 12772 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 3 12585
70 % 3 3 11862
50 % 3 3 10600
40 % 3 3 9606
30 % 3 3 8373

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures