Sequence Similarity Clusters for the Entities in PDB 4DRF

Entity #1 | Chains: A,C
Metallophosphoesterase protein, length: 427 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 4 6143
95 % 3 5 5510 Flexibility: Medium
Max RMSD: 10.4, Avg RMSD: 6.3
PDBFlex
90 % 3 5 5526
70 % 3 5 5446
50 % 3 5 5171
40 % 3 5 4881
30 % 3 5 4447
Entity #2 | Chains: B,D
Methyltransferase type 12 protein, length: 230 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 3 12980
95 % 3 3 12490 Flexibility: Low
Max RMSD: 1.3, Avg RMSD: 0.8
PDBFlex
90 % 3 3 12313
70 % 3 3 11619
50 % 3 3 10393
40 % 3 3 9422
30 % 3 3 8217

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures