Sequence Similarity Clusters for the Entities in PDB 4DQM

Entity #1 | Chains: A,C
Retinoic acid receptor alpha protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 8943
95 % 6 6 9213 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.4
PDBFlex
90 % 6 6 9126
70 % 22 22 2087
50 % 22 22 2091
40 % 22 22 2094
30 % 869 1006 10
Entity #2 | Chains: B,D
Nuclear receptor coactivator 1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures