Sequence Similarity Clusters for the Entities in PDB 4DQM

Entity #1 | Chains: A,C
Retinoic acid receptor alpha protein, length: 234 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 6 8431
95 % 6 6 8705 Flexibility: Low
Max RMSD: 2.1, Avg RMSD: 1.5
PDBFlex
90 % 6 6 8632
70 % 21 21 2038
50 % 21 21 2029
40 % 21 21 2031
30 % 807 937 10
Entity #2 | Chains: B,D
Nuclear receptor coactivator 1 protein, length: 10 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.