Sequence Similarity Clusters for the Entities in PDB 4DQJ

Entity #1 | Chains: A,B
Membrane protein Phi6 P5 protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12768
95 % 1 3 12232 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.1
PDBFlex
90 % 1 3 12055
70 % 1 3 11398
50 % 1 3 10193
40 % 1 3 9198
30 % 1 3 7924

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 4DQJ 1 A, B Membrane protein Phi6 P5 UNP residues 48-220 10879
2 4DQ5 1 A, B Membrane protein Phi6 P5wt UNP residues 48-220 10879
3 4DQ7 1 A, B Membrane protein Phi6 P5 UNP residues 48-220 10879