Sequence Similarity Clusters for the Entities in PDB 4DQJ

Entity #1 | Chains: A,B
Membrane protein Phi6 P5 protein, length: 173 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 3 12685
95 % 1 3 12163 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.1
PDBFlex
90 % 1 3 11984
70 % 1 3 11338
50 % 1 3 10141
40 % 1 3 9159
30 % 1 3 7884

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures