Sequence Similarity Clusters for the Entities in PDB 4DPG

Entity #1 | Chains: A,B,C,D,E,F,G,H
Lysine--tRNA ligase protein, length: 513 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 3 3 3556
95 % 3 4 3220
90 % 3 4 3269
70 % 3 4 3230
50 % 6 10 1165
40 % 14 21 799
30 % 14 21 789
Entity #2 | Chains: I,J,K,L
Aminoacyl tRNA synthase complex-interacting multifunctional protein 2 protein, length: 54 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 23227
95 % 1 1 19816
90 % 1 1 19277
70 % 2 3 7340
50 % 2 3 6784
40 % 2 3 6305
30 % 2 3 5621

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.