Sequence Similarity Clusters for the Entities in PDB 4DO6

Entity #1 | Chains: A,B
Alpha-N-acetylgalactosaminidase protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 3 7 3759
95 % 3 7 4534 Flexibility: No
Max RMSD: 0.6, Avg RMSD: 0.2
PDBFlex
90 % 3 7 4557
70 % 3 9 3867
50 % 3 9 3766
40 % 3 26 1120
30 % 4 28 1062

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.