Sequence Similarity Clusters for the Entities in PDB 4DO4

Entity #1 | Chains: A,B
Alpha-N-acetylgalactosaminidase protein, length: 400 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 7 3663
95 % 1 7 4431 Flexibility: No
Max RMSD: 0.4, Avg RMSD: 0.2
PDBFlex
90 % 1 7 4452
70 % 1 9 3790
50 % 1 9 3689
40 % 1 26 1103
30 % 1 28 1046

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.