Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3960
95 % 4 8 4310 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 5.0
PDBFlex
90 % 4 8 4354
70 % 4 8 4263
50 % 4 8 4111
40 % 4 8 3894
30 % 4 8 3549
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63535
95 % 6 11 6695 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.6
PDBFlex
90 % 6 11 6685
70 % 6 11 6671
50 % 6 11 6217
40 % 6 11 5624
30 % 8 13 2810

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3NE5 2 A Cation efflux system protein cusA 562
2 4DNT 2 A Cation efflux system protein CusA 562
3 3T53 2 A Cation efflux system protein CusA 562
4 3K07 1 A Cation efflux system protein cusA 562
5 3T56 1 A Cation efflux system protein CusA 562
6 4DNR 2 A Cation efflux system protein CusA 562
7 4DOP 2 A Cation efflux system protein CusA 562
8 3KSS 1 A Cation efflux system protein cusA 562
9 3T51 2 A Cation efflux system protein CusA 562
10 3K0I 1 A Cation efflux system protein cusA Resistance-Nodulation-Cell Division (RND) Heavy-metal Transporter 562
11 3KSO 1 A Cation efflux system protein cusA 562