Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 4245
95 % 4 8 4606 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 5.0
PDBFlex
90 % 4 8 4634
70 % 4 8 4520
50 % 4 8 4308
40 % 4 8 4086
30 % 4 8 3705
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 66480
95 % 6 11 7097 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.6
PDBFlex
90 % 6 11 7061
70 % 6 11 6834
50 % 6 11 6321
40 % 6 11 5869
30 % 8 13 2985

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3NE5 2 A Cation efflux system protein cusA 562
2 4DNT 2 A Cation efflux system protein CusA 562
3 3T53 2 A Cation efflux system protein CusA 562
4 3K07 1 A Cation efflux system protein cusA 562
5 3T56 1 A Cation efflux system protein CusA 562
6 4DNR 2 A Cation efflux system protein CusA 562
7 4DOP 2 A Cation efflux system protein CusA 562
8 3KSS 1 A Cation efflux system protein cusA 562
9 3T51 2 A Cation efflux system protein CusA 562
10 3K0I 1 A Cation efflux system protein cusA Resistance-Nodulation-Cell Division (RND) Heavy-metal Transporter 562
11 3KSO 1 A Cation efflux system protein cusA 562