Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 4104
95 % 4 8 4462 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 5.0
PDBFlex
90 % 4 8 4504
70 % 4 8 4406
50 % 4 8 4237
40 % 4 8 4011
30 % 4 8 3641
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 65129
95 % 6 11 6920 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.6
PDBFlex
90 % 6 11 6891
70 % 6 11 6678
50 % 6 11 6204
40 % 6 11 5765
30 % 8 13 2886

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3NE5 2 A Cation efflux system protein cusA 562
2 4DNT 2 A Cation efflux system protein CusA 562
3 3T53 2 A Cation efflux system protein CusA 562
4 3K07 1 A Cation efflux system protein cusA 562
5 3T56 1 A Cation efflux system protein CusA 562
6 4DNR 2 A Cation efflux system protein CusA 562
7 4DOP 2 A Cation efflux system protein CusA 562
8 3KSS 1 A Cation efflux system protein cusA 562
9 3T51 2 A Cation efflux system protein CusA 562
10 3K0I 1 A Cation efflux system protein cusA Resistance-Nodulation-Cell Division (RND) Heavy-metal Transporter 562
11 3KSO 1 A Cation efflux system protein cusA 562