Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3249
95 % 4 8 4007 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 5.1
PDBFlex
90 % 4 8 4046
70 % 4 8 3993
50 % 4 8 3870
40 % 4 8 3714
30 % 4 8 3467
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50443
95 % 6 11 6289 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.8
PDBFlex
90 % 6 11 6282
70 % 6 11 6120
50 % 6 11 5725
40 % 6 11 5377
30 % 8 13 2776

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures