Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3042
95 % 4 8 3798 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 4.9
PDBFlex
90 % 4 8 3834
70 % 4 8 3785
50 % 4 8 3683
40 % 4 8 3547
30 % 4 8 3309
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48042
95 % 6 11 5922 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.6
PDBFlex
90 % 6 11 5912
70 % 6 11 5780
50 % 6 11 5419
40 % 6 11 5098
30 % 8 13 2638

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.