Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3329
95 % 4 8 4106 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 5.1
PDBFlex
90 % 4 8 4149
70 % 4 8 4090
50 % 4 8 3957
40 % 4 8 3790
30 % 4 8 3537
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51378
95 % 6 11 6416 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.8
PDBFlex
90 % 6 11 6415
70 % 6 11 6244
50 % 6 11 5833
40 % 6 11 5477
30 % 8 13 2824

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures