Sequence Similarity Clusters for the Entities in PDB 4DNR

Entity #1 | Chains: B,C
Cation efflux system protein CusB protein, length: 413 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 8 3922
95 % 4 8 4272 Flexibility: Medium
Max RMSD: 9.6, Avg RMSD: 5.0
PDBFlex
90 % 4 8 4316
70 % 4 8 4226
50 % 4 8 4084
40 % 4 8 3871
30 % 4 8 3531
Entity #2 | Chains: A
Cation efflux system protein CusA protein, length: 1054 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 63246
95 % 6 11 6652 Flexibility: Low
Max RMSD: 4.1, Avg RMSD: 2.6
PDBFlex
90 % 6 11 6645
70 % 6 11 6629
50 % 6 11 6176
40 % 6 11 5586
30 % 8 13 2801

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures