Sequence Similarity Clusters for the Entities in PDB 4DNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
DAD2 protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3619
95 % 4 4 3978 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 4 4 4030
70 % 14 16 1336
50 % 25 27 1075
40 % 27 29 1019
30 % 28 30 971

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 6AP7 1 A, B Probable strigolactone esterase DAD2 4102
2 6AP6 1 A, B Probable strigolactone esterase DAD2 4102
3 4DNP 1 A DAD2 4102
4 4DNQ 1 A, B, C, D, E, F, G, H, I, J, K, L DAD2 4102