Sequence Similarity Clusters for the Entities in PDB 4DNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
DAD2 protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3664
95 % 4 4 4020 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 4 4 4071
70 % 14 16 1347
50 % 25 27 1085
40 % 27 29 1024
30 % 28 30 978

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3W06 1 A Hydrolase, alpha/beta fold family protein 3702
2 5DNU 1 A ShKAI2iB 68872
3 6AP8 1 A, B Strigolactone esterase D14 residues 52-318 4530 3.1 | Details
4 4JYP 1 A, B Hydrolase, alpha/beta fold family protein 3702
5 6ELX 1 A, B Strigolactone esterase D14 4530 3.1 | Details
6 4JYM 1 A, B Hydrolase, alpha/beta fold family protein 3702
7 3W04 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
8 6AP7 1 A, B Probable strigolactone esterase DAD2 4102
9 4HRY 1 A Hydrolase, alpha/beta fold family protein 3702
10 4IH1 1 A Hydrolase, alpha/beta fold family protein 3702
11 3W05 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
12 4IH9 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
13 4IHA 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
14 6AP6 1 A, B Probable strigolactone esterase DAD2 4102
15 3VXK 1 A, B Dwarf 88 esterase UNP residues 54-318 4530 3.1 | Details
16 4HTA 1 A Hydrolase, alpha/beta fold family protein 3702
17 5YZ7 1 A, B Strigolactone esterase D14 4530 3.1 | Details
18 5DNW 1 A ShKAI2iB 68872
19 4HRX 1 A Hydrolase, alpha/beta fold family protein 3702
20 4DNP 1 A DAD2 4102
21 3WIO 1 A, B Probable strigolactone esterase D14 UNP RESIDUES 54-318 4530 3.1 | Details
22 5CBK 1 A ShHTL5 68872
23 5DJ5 1 A, B Probable strigolactone esterase D14 alpha/beta hydrolase residues 52-318 4530 3.1 | Details
24 1WOM 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
25 5DNV 1 A ShKAI2iB 68872
26 1WPR 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
27 4DNQ 1 A, B, C, D, E, F, G, H, I, J, K, L DAD2 4102
28 5HZG 1 A, E Strigolactone esterase D14 3702 3.1 | Details
29 4IH4 1 A, B, C, D AT3g03990/T11I18_10 3702 3.1 | Details