Sequence Similarity Clusters for the Entities in PDB 4DNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
DAD2 protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 4956
95 % 2 2 5087 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 2 2 5109
70 % 9 11 1711
50 % 20 22 1235
40 % 22 24 1145
30 % 23 25 1095

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3W06 1 A Hydrolase, alpha/beta fold family protein 3702
2 5DNU 1 A ShKAI2iB 68872
3 4JYP 1 A, B Hydrolase, alpha/beta fold family protein 3702
4 4JYM 1 A, B Hydrolase, alpha/beta fold family protein 3702
5 3W04 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
6 4HRY 1 A Hydrolase, alpha/beta fold family protein 3702
7 4IH1 1 A Hydrolase, alpha/beta fold family protein 3702
8 3W05 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
9 4IH9 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
10 4IHA 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
11 3VXK 1 A, B Dwarf 88 esterase UNP residues 54-318 4530 3.1 | Details
12 4HTA 1 A Hydrolase, alpha/beta fold family protein 3702
13 5DNW 1 A ShKAI2iB 68872
14 4HRX 1 A Hydrolase, alpha/beta fold family protein 3702
15 4DNP 1 A DAD2 4102
16 3WIO 1 A, B Probable strigolactone esterase D14 UNP RESIDUES 54-318 4530 3.1 | Details
17 5CBK 1 A ShHTL5 68872
18 5DJ5 1 A, B Probable strigolactone esterase D14 alpha/beta hydrolase residues 52-318 4530 3.1 | Details
19 1WOM 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
20 5DNV 1 A ShKAI2iB 68872
21 1WPR 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
22 4DNQ 1 A, B, C, D, E, F, G, H, I, J, K, L DAD2 4102
23 5HZG 1 A, E Strigolactone esterase D14 3702 3.1 | Details
24 4IH4 1 A, B, C, D AT3g03990/T11I18_10 3702