Sequence Similarity Clusters for the Entities in PDB 4DNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
DAD2 protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5022
95 % 2 2 5162 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 2 2 5184
70 % 9 11 1728
50 % 20 22 1251
40 % 22 24 1158
30 % 23 25 1106

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3W06 1 A Hydrolase, alpha/beta fold family protein 3702
2 5DNU 1 A ShKAI2iB 68872
3 4JYP 1 A, B Hydrolase, alpha/beta fold family protein 3702
4 4JYM 1 A, B Hydrolase, alpha/beta fold family protein 3702
5 3W04 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
6 4HRY 1 A Hydrolase, alpha/beta fold family protein 3702
7 4IH1 1 A Hydrolase, alpha/beta fold family protein 3702
8 3W05 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
9 4IH9 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
10 4IHA 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
11 3VXK 1 A, B Dwarf 88 esterase UNP residues 54-318 4530 3.1 | Details
12 4HTA 1 A Hydrolase, alpha/beta fold family protein 3702
13 5DNW 1 A ShKAI2iB 68872
14 4HRX 1 A Hydrolase, alpha/beta fold family protein 3702
15 4DNP 1 A DAD2 4102
16 3WIO 1 A, B Probable strigolactone esterase D14 UNP RESIDUES 54-318 4530 3.1 | Details
17 5CBK 1 A ShHTL5 68872
18 5DJ5 1 A, B Probable strigolactone esterase D14 alpha/beta hydrolase residues 52-318 4530 3.1 | Details
19 1WOM 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
20 5DNV 1 A ShKAI2iB 68872
21 1WPR 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
22 4DNQ 1 A, B, C, D, E, F, G, H, I, J, K, L DAD2 4102
23 5HZG 1 A, E Strigolactone esterase D14 3702 3.1 | Details
24 4IH4 1 A, B, C, D AT3g03990/T11I18_10 3702