Sequence Similarity Clusters for the Entities in PDB 4DNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
DAD2 protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 4 4 3648
95 % 4 4 4005 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 4 4 4057
70 % 14 16 1345
50 % 25 27 1079
40 % 27 29 1023
30 % 28 30 977

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 3W06 1 A Hydrolase, alpha/beta fold family protein 3702
2 5DNU 1 A ShKAI2iB 68872
3 6AP8 1 A, B Strigolactone esterase D14 residues 52-318 4530 3.1 | Details
4 4JYP 1 A, B Hydrolase, alpha/beta fold family protein 3702
5 6ELX 1 A, B Strigolactone esterase D14 4530 3.1 | Details
6 4JYM 1 A, B Hydrolase, alpha/beta fold family protein 3702
7 3W04 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
8 6AP7 1 A, B Probable strigolactone esterase DAD2 4102
9 4HRY 1 A Hydrolase, alpha/beta fold family protein 3702
10 4IH1 1 A Hydrolase, alpha/beta fold family protein 3702
11 3W05 1 A, B Dwarf 88 esterase UNP residues 55-318 4530 3.1 | Details
12 4IH9 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
13 4IHA 1 A, B Dwarf 88 esterase UNP residues 51-318 4530 3.1 | Details
14 6AP6 1 A, B Probable strigolactone esterase DAD2 4102
15 3VXK 1 A, B Dwarf 88 esterase UNP residues 54-318 4530 3.1 | Details
16 4HTA 1 A Hydrolase, alpha/beta fold family protein 3702
17 3QVM 1 A, B Olei00960 188908
18 5YZ7 1 A, B Strigolactone esterase D14 4530 3.1 | Details
19 5DNW 1 A ShKAI2iB 68872
20 4HRX 1 A Hydrolase, alpha/beta fold family protein 3702
21 4DNP 1 A DAD2 4102
22 3WIO 1 A, B Probable strigolactone esterase D14 UNP RESIDUES 54-318 4530 3.1 | Details
23 5CBK 1 A ShHTL5 68872
24 5DJ5 1 A, B Probable strigolactone esterase D14 alpha/beta hydrolase residues 52-318 4530 3.1 | Details
25 1WOM 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
26 5DNV 1 A ShKAI2iB 68872
27 1WPR 1 A, B Sigma factor sigB regulation protein rsbQ residues 5-269 1423
28 4DNQ 1 A, B, C, D, E, F, G, H, I, J, K, L DAD2 4102
29 5HZG 1 A, E Strigolactone esterase D14 3702 3.1 | Details
30 4IH4 1 A, B, C, D AT3g03990/T11I18_10 3702 3.1 | Details