Sequence Similarity Clusters for the Entities in PDB 4DNQ

Entity #1 | Chains: A,B,C,D,E,F,G,H,I,J,K,L
DAD2 protein, length: 269 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 5085
95 % 2 2 5221 Flexibility: No
Max RMSD: 0.3, Avg RMSD: 0.1
PDBFlex
90 % 2 2 5244
70 % 9 11 1758
50 % 20 22 1266
40 % 22 24 1169
30 % 23 25 1114

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures