Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 40069
95 % 51 78 270
90 % 437 695 3
70 % 1428 2274 1
50 % 2902 4607 1
40 % 2902 4607 1
30 % 3364 5422 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 39116
95 % 8 10 5022
90 % 18 28 1212
70 % 1404 2232 2
50 % 2903 4607 1
40 % 2903 4607 1
30 % 3365 5422 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 70612
95 % 7 11 4195
90 % 7 11 4226
70 % 7 14 3176
50 % 9 19 2296
40 % 27 58 307
30 % 30 63 283

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.