Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34516
95 % 3 3 10433
90 % 286 461 4
70 % 986 1526 3
50 % 2389 3692 1
40 % 2390 3693 1
30 % 2739 4355 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 33669
95 % 3 3 19460
90 % 13 19 1506
70 % 1159 1790 1
50 % 2390 3692 1
40 % 2391 3693 1
30 % 2740 4355 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61794
95 % 7 11 3580
90 % 7 11 3614
70 % 7 14 2715
50 % 9 19 1962
40 % 23 52 347
30 % 26 57 318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.