Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36290
95 % 3 3 11062
90 % 316 518 3
70 % 1056 1639 3
50 % 2556 3985 1
40 % 2557 3986 1
30 % 2959 4715 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 35412
95 % 6 7 6854
90 % 16 24 1227
70 % 1239 1932 1
50 % 2557 3985 1
40 % 2558 3986 1
30 % 2960 4715 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 64712
95 % 7 11 3768
90 % 7 11 3793
70 % 7 14 2862
50 % 9 19 2057
40 % 26 57 285
30 % 29 62 269

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.