Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38582
95 % 49 74 279
90 % 407 644 3
70 % 1139 1773 2
50 % 2792 4363 1
40 % 2792 4363 1
30 % 3232 5147 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37662
95 % 6 7 7303
90 % 16 25 1291
70 % 1349 2109 1
50 % 2793 4363 1
40 % 2793 4363 1
30 % 3233 5147 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68324
95 % 7 11 4037
90 % 7 11 4063
70 % 7 14 3065
50 % 9 19 2203
40 % 26 57 315
30 % 29 62 290

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.