Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37718
95 % 47 72 275
90 % 398 624 3
70 % 1115 1729 2
50 % 2705 4220 1
40 % 2705 4221 1
30 % 3118 4972 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36808
95 % 6 7 7126
90 % 16 25 1251
70 % 1307 2041 1
50 % 2706 4220 1
40 % 2706 4221 1
30 % 3119 4972 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66920
95 % 7 11 3954
90 % 7 11 3981
70 % 7 14 3005
50 % 9 19 2156
40 % 26 57 303
30 % 29 62 279

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.