Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 38902
95 % 49 75 279
90 % 419 665 3
70 % 1155 1803 2
50 % 2826 4435 1
40 % 2826 4435 1
30 % 3272 5225 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37976
95 % 6 7 7383
90 % 16 25 1301
70 % 1366 2145 1
50 % 2827 4435 1
40 % 2827 4435 1
30 % 3273 5225 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 68785
95 % 7 11 4072
90 % 7 11 4096
70 % 7 14 3086
50 % 9 19 2219
40 % 26 57 316
30 % 29 62 292

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.