Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 34463
95 % 3 3 10418
90 % 286 461 4
70 % 979 1519 3
50 % 2374 3677 1
40 % 2375 3678 1
30 % 2723 4338 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 33619
95 % 3 3 19433
90 % 13 19 1502
70 % 1151 1782 1
50 % 2375 3677 1
40 % 2376 3678 1
30 % 2724 4338 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 61703
95 % 7 11 3577
90 % 7 11 3610
70 % 7 14 2711
50 % 9 19 1958
40 % 23 52 347
30 % 26 57 318

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.