Sequence Similarity Clusters for the Entities in PDB 4DN4

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 37314
95 % 47 71 273
90 % 395 618 3
70 % 1105 1710 2
50 % 2675 4166 1
40 % 2675 4167 1
30 % 3085 4915 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 228 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 2 2 36413
95 % 6 7 7056
90 % 16 25 1238
70 % 1294 2016 1
50 % 2676 4166 1
40 % 2676 4167 1
30 % 3086 4915 1
Entity #3 | Chains: M
C-C motif chemokine 2 protein, length: 76 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 66336
95 % 7 11 3895
90 % 7 11 3924
70 % 7 14 2971
50 % 9 19 2126
40 % 26 57 298
30 % 29 62 276

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.