Sequence Similarity Clusters for the Entities in PDB 4DN3

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41594
95 % 46 85 251 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.9
PDBFlex
90 % 397 763 2
70 % 1251 2426 1
50 % 2556 4913 1
40 % 2556 4913 1
30 % 2920 5780 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40609
95 % 6 10 5257 Flexibility: Medium
Max RMSD: 5.6, Avg RMSD: 3.1
PDBFlex
90 % 18 30 1180
70 % 1240 2376 2
50 % 2557 4913 1
40 % 2557 4913 1
30 % 2921 5780 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures