Sequence Similarity Clusters for the Entities in PDB 4DN3

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 42151
95 % 47 90 246 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.9
PDBFlex
90 % 415 791 2
70 % 1282 2479 1
50 % 2619 5021 1
40 % 2619 5021 1
30 % 3029 5951 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 41150
95 % 6 10 5336 Flexibility: Medium
Max RMSD: 5.6, Avg RMSD: 3.1
PDBFlex
90 % 18 31 1150
70 % 1271 2429 2
50 % 2620 5021 1
40 % 2620 5021 1
30 % 3030 5951 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures