Sequence Similarity Clusters for the Entities in PDB 4DN3

Entity #1 | Chains: L
CNTO888 LIGHT CHAIN protein, length: 216 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 40709
95 % 46 84 247 Flexibility: Low
Max RMSD: 6.2, Avg RMSD: 1.9
PDBFlex
90 % 369 721 3
70 % 1189 2329 1
50 % 2431 4717 1
40 % 2431 4717 1
30 % 2785 5571 1
Entity #2 | Chains: H
CNTO888 HEAVY CHAIN protein, length: 225 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 39741
95 % 6 10 5125 Flexibility: Medium
Max RMSD: 5.6, Avg RMSD: 3.1
PDBFlex
90 % 16 28 1231
70 % 1180 2282 2
50 % 2432 4717 1
40 % 2432 4717 1
30 % 2786 5571 1

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.