Sequence Similarity Clusters for the Entities in PDB 4DMI

Entity #1 | Chains: A,B,C,D,E
Capsid Protein protein, length: 176 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 2 6361
95 % 1 2 6936 Flexibility: Low
Max RMSD: 3.3, Avg RMSD: 2.2
PDBFlex
90 % 1 2 6907
70 % 1 2 6703
50 % 1 2 6210
40 % 1 2 5787
30 % 1 2 5187

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.