Sequence Similarity Clusters for the Entities in PDB 4DMD

Entity #1 | Chains: A,B
GCN4-p1 leucine zipper domain protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 18 930
95 % 17 23 937
90 % 25 36 525
70 % 62 98 163
50 % 65 108 185
40 % 65 108 196
30 % 65 108 215

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures