Sequence Similarity Clusters for the Entities in PDB 4DMD

Entity #1 | Chains: A,B
GCN4-p1 leucine zipper domain protein, length: 34 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 16 18 948
95 % 17 23 961
90 % 25 36 544
70 % 62 98 166
50 % 65 108 190
40 % 65 108 201
30 % 65 108 219

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures