Sequence Similarity Clusters for the Entities in PDB 4DL0

Entity #1 | Chains: C,I
V-type proton ATPase subunit C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 25812
95 % 1 2 21426
90 % 1 2 20747
70 % 1 2 19016
50 % 1 2 16565
40 % 1 2 14797
30 % 1 2 12660
Entity #2 | Chains: G,K
V-type proton ATPase subunit G protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 1721
95 % 1 7 2242
90 % 1 7 2282
70 % 1 7 2290
50 % 1 7 2282
40 % 1 7 2267
30 % 1 7 2142
Entity #3 | Chains: E,J
V-type proton ATPase subunit E protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 7 1643
95 % 1 7 2169
90 % 1 7 2217
70 % 1 7 2224
50 % 1 7 2221
40 % 1 7 2214
30 % 1 7 2101

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.