Sequence Similarity Clusters for the Entities in PDB 4DL0

Entity #1 | Chains: C,I
V-type proton ATPase subunit C protein, length: 130 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 2 28639
95 % 1 2 23764
90 % 1 2 22998
70 % 1 2 20965
50 % 1 2 18160
40 % 1 2 16192
30 % 1 2 13842
Entity #2 | Chains: G,K
V-type proton ATPase subunit G protein, length: 119 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 1222
95 % 1 10 1641
90 % 1 10 1677
70 % 1 10 1701
50 % 1 10 1743
40 % 1 10 1753
30 % 1 10 1703
Entity #3 | Chains: E,J
V-type proton ATPase subunit E protein, length: 233 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 10 1210
95 % 1 10 1631
90 % 1 10 1668
70 % 1 10 1691
50 % 1 10 1731
40 % 1 10 1741
30 % 1 10 1695

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.