Sequence Similarity Clusters for the Entities in PDB 4DKY

Entity #1 | Chains: A,B
DNA-binding protein HU homolog protein, length: 106 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 18799
95 % 2 2 17198 Flexibility: Low
Max RMSD: 1.1, Avg RMSD: 0.6
PDBFlex
90 % 2 2 16801
70 % 2 2 15607
50 % 2 2 13694
40 % 19 48 761
30 % 19 49 742

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures