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CpG specific methyltransferase in complex with target DNA
Sequence Clustering and Redundancy Reduction Results
4DKJ
Sequence Clusters for the Sequence Entities in PDB 4DKJ
Entity #1: Chains: A - Cytosine-specific methyltransferase protein, length: 403 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 1 1 39652
95% 1 1 29193
90% 1 1 28085
70% 1 1 25315
50% 1 1 21910
40% 1 1 19470
30% 1 1 16645
Entity #2: Chains: B - DNA (5'-D(*CP*CP*AP*CP*AP*TP*GP*(C37)P*GP*CP*TP*GP*AP*A)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
Entity #3: Chains: C - DNA (5'-D(*GP*TP*TP*CP*AP*GP*(5CM)P*GP*CP*AP*TP*GP*TP*G)-3') dna, length: 14 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.