Sequence Similarity Clusters for the Entities in PDB 4DJM

Entity #1 | Chains: A,B,C,D,E,F,G,H
DraB protein, length: 239 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 8974
95 % 1 1 9239 Flexibility: Low
Max RMSD: 0.9, Avg RMSD: 0.7
PDBFlex
90 % 1 1 9143
70 % 1 1 8765
50 % 3 3 6338
40 % 12 14 2056
30 % 25 42 597

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures