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X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of potassium ions
Sequence Clustering and Redundancy Reduction Results
4DII
Sequence Clusters for the Sequence Entities in PDB 4DII
Entity #1: Chains: L - Prothrombin protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 177 305 13
95% 177 306 20
90% 177 306 24
70% 177 308 30
50% 177 308 46
40% 177 308 63
30% 177 308 86
Entity #2: Chains: H - Prothrombin protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 158 262 16
95% 196 343 18
90% 198 350 19
70% 198 374 22
50% 198 374 25
40% 950 1460 3
30% 1021 1576 5
Entity #3: Chains: D - Thrombin binding aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.