POP-OUT | CLOSE

An Information Portal to 108395 Biological Macromolecular Structures

X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of potassium ions
Sequence Clustering and Redundancy Reduction Results
4DII
Sequence Clusters for the Sequence Entities in PDB 4DII
Entity #1: Chains: L - Prothrombin protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 178 306 14
95% 178 307 21
90% 178 307 26
70% 178 309 36
50% 178 309 52
40% 178 309 67
30% 178 309 91
Entity #2: Chains: H - Prothrombin protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 158 262 28
95% 198 345 18
90% 200 352 19
70% 200 376 23
50% 200 376 29
40% 978 1503 3
30% 1055 1632 6
Entity #3: Chains: D - Thrombin binding aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.