Sequence Similarity Clusters for the Entities in PDB 4DIH

Entity #1 | Chains: L
Prothrombin protein, length: 36 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 104 322 39
95 % 104 323 55
90 % 104 323 59
70 % 104 325 67
50 % 104 325 91
40 % 104 325 113
30 % 104 325 127
Entity #2 | Chains: H
Prothrombin protein, length: 259 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 92 278 50
95 % 108 361 19
90 % 108 368 22
70 % 108 392 26
50 % 108 392 45
40 % 669 1574 3
30 % 711 1715 6
Entity #3 | Chains: D
Thrombin binding aptamer dna, length: 15 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.