POP-OUT | CLOSE

An Information Portal to 108607 Biological Macromolecular Structures

X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of sodium ions
Sequence Clustering and Redundancy Reduction Results
4DIH
Sequence Clusters for the Sequence Entities in PDB 4DIH
Entity #1: Chains: L - Prothrombin protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 90 306 14
95% 90 307 21
90% 90 307 26
70% 90 309 37
50% 90 309 53
40% 90 309 68
30% 90 309 92
Entity #2: Chains: H - Prothrombin protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 78 262 28
95% 94 345 18
90% 94 352 19
70% 94 376 23
50% 94 376 30
40% 627 1503 3
30% 664 1632 6
Entity #3: Chains: D - Thrombin binding aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.