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X-ray structure of the complex between human alpha thrombin and thrombin binding aptamer in the presence of sodium ions
Sequence Clustering and Redundancy Reduction Results
4DIH
Sequence Clusters for the Sequence Entities in PDB 4DIH
Entity #1: Chains: L - Prothrombin protein, length: 36 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 89 305 13
95% 89 306 20
90% 89 306 24
70% 89 308 31
50% 89 308 46
40% 89 308 63
30% 89 308 86
Entity #2: Chains: H - Prothrombin protein, length: 259 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
100% 78 262 16
95% 92 343 18
90% 92 350 19
70% 92 374 22
50% 92 374 25
40% 613 1464 3
30% 648 1580 5
Entity #3: Chains: D - Thrombin binding aptamer dna, length: 15 [Blast  ]
Cluster Sequence Similarity Cutoff Rank   Nr. of chains in Cluster Cluster Nr.  
 

Documentation

Click here for more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB.