Sequence Similarity Clusters for the Entities in PDB 4DI2

Entity #1 | Chains: A,B,C
Beta-secretase 1 protein, length: 411 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 136 280 21
95 % 190 363 15 Flexibility: Low
Max RMSD: 2.0, Avg RMSD: 0.9
PDBFlex
90 % 190 363 16
70 % 190 363 24
50 % 193 375 41
40 % 193 375 54
30 % 193 375 72

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures