Sequence Similarity Clusters for the Entities in PDB 4DDQ

Entity #1 | Chains: A,B,C,D,E,F
DNA gyrase subunit A protein, length: 502 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 11286
95 % 1 1 11192 Flexibility: Low
Max RMSD: 2.5, Avg RMSD: 1.7
PDBFlex
90 % 1 1 11046
70 % 8 9 2071
50 % 31 45 504
40 % 31 45 547
30 % 31 45 547

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.