Sequence Similarity Clusters for the Entities in PDB 4DCO

Entity #1 | Chains: A,D
Caspase-3 subunit p17 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 39 826
95 % 14 40 982 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 14 40 1003
70 % 14 40 1040
50 % 14 41 1061
40 % 15 48 818
30 % 15 48 822
Entity #2 | Chains: B,E
Caspase-3 subunit p12 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 18 38 787
95 % 19 53 647 Flexibility: No
Max RMSD: 3.6, Avg RMSD: 0.4
PDBFlex
90 % 19 56 613
70 % 19 56 657
50 % 20 80 422
40 % 20 81 444
30 % 22 97 331
Entity #3 | Chains: C,F
Caspase Inhibitor AC-DEVD-CHO protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures


ACTION - (A) Select for download / view details OR (B) Select two chains for comparison
Rank PDB ID Entity ID Chains Description Details Taxonomy EC Number
1 2DKO 1 A Caspase-3 Caspase-3 p17 subunit, residues 29-174 9606 3.4.22.56 | Details
2 2XYG 1 A CASPASE-3 SUBUNIT P17 RESIDUES 29-174 9606 3.4.22.56 | Details
3 1NME 1 A Caspase-3 large subunit 9606 3.4.22.56 | Details
4 2CJY 1 A CASPASE-3 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
5 2H5I 1 A caspase-3, p17 subunit residues 29-174 9606 3.4.22.56 | Details
6 2CDR 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT RESIDUES 29-175 9606 3.4.22.56 | Details
7 2CNL 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
8 3EDQ 1 A, C Caspase-3 UNP RESIDUES 29-175 9606 3.4.22.56 | Details
9 2CJX 1 A CASPASE-3 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
10 2CNK 1 A CASPASE-3 P17 SUBUNIT ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
11 2CNN 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT 9606 3.4.22.56 | Details
12 2C1E 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
13 4DCJ 1 A, D Caspase-3 subunit p17 9606 3.4.22.56 | Details
14 4DCO 1 A, D Caspase-3 subunit p17 9606 3.4.22.56 | Details
15 4DCP 1 A, D Caspase-3 subunit p17 9606 3.4.22.56 | Details
16 2XYP 1 A CASPASE-3 SUBUNIT P17 RESIDUES 29-174 9606 3.4.22.56 | Details
17 2XYH 1 A CASPASE-3 SUBUNIT P17 RESIDUES 29-174 9606 3.4.22.56 | Details
18 2C2K 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
19 2C2M 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
20 2CNO 1 A CASPASE-3 P17 SUBUNIT ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
21 3KJF 1 A Caspase-3 9606 3.4.22.56 | Details
22 3GJS 1 A, C Caspase-3 subunit p17 9606 3.4.22.56 | Details
23 2H5J 1 A, C caspase-3, p17 subunit residues 29-174 9606 3.4.22.56 | Details
24 2XZD 1 A, C CASPASE-3 P17 SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
25 2Y0B 1 A, C CASPASE-3 SUBUNIT P17 9606 3.4.22.56 | Details
26 1RHJ 1 A, C Caspase-3 P17 subunit 9606 3.4.22.56 | Details
27 3GJR 1 A, C Caspase-3 subunit p17 9606 3.4.22.56 | Details
28 2C2O 1 A CASPASE-3 SUBUNIT P17 ALPHA SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
29 2H65 1 A, C caspase-3, p17 subunit residues 29-174 9606 3.4.22.56 | Details
30 1RHU 1 A Caspase-3 P17 SUBUNIT 9606 3.4.22.56 | Details
31 3GJT 1 A, C Caspase-3 subunit p17 9606 3.4.22.56 | Details
32 1RHK 1 A Caspase-3 P17 SUBUNIT 9606 3.4.22.56 | Details
33 1RHM 1 A, C CASP-3 P17 SUBUNIT 9606 3.4.22.56 | Details
34 1RE1 1 A Caspase-3 P17 subunit 9606 3.4.22.56 | Details
35 1PAU 1 A APOPAIN 9606 3.4.22.56 | Details
36 1I51 1 A, C CASPASE-7 SUBUNIT P20 9606 3.4.22.60 | Details
37 2XZT 1 A, C CASPASE-3 P17 SUBUNIT, RESIDUES 29-175 9606 3.4.22.56 | Details
38 1GFW 1 A CASPASE-3 (APOPAIN, P20) ACTIVATED MATURE CASPASE-3 (P20) WITHOUT PRO-DOMAIN OR LINKER (RESIDUES 29-175) 9606 3.4.22.56 | Details
39 3GJQ 1 A, C Caspase-3 subunit p17 9606 3.4.22.56 | Details
40 1RHR 1 A Caspase-3 P17 subunit 9606 3.4.22.56 | Details
41 1RHQ 1 A, D Caspase-3 P17 SUBUNIT 9606 3.4.22.56 | Details