Sequence Similarity Clusters for the Entities in PDB 4DCO

Entity #1 | Chains: A,D
Caspase-3 subunit p17 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 44193
95 % 14 40 916 Flexibility: No
Max RMSD: 0.7, Avg RMSD: 0.4
PDBFlex
90 % 14 40 949
70 % 14 40 979
50 % 14 41 993
40 % 15 48 764
30 % 15 48 755
Entity #2 | Chains: B,E
Caspase-3 subunit p12 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 13 36 712
95 % 14 39 918 Flexibility: No
Max RMSD: 3.6, Avg RMSD: 0.4
PDBFlex
90 % 14 42 838
70 % 14 42 873
50 % 15 66 447
40 % 15 67 473
30 % 17 83 328
Entity #3 | Chains: C,F
Caspase Inhibitor AC-DEVD-CHO protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.