Sequence Similarity Clusters for the Entities in PDB 4DCJ

Entity #1 | Chains: A,D
Caspase-3 subunit p17 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 39272
95 % 13 40 760
90 % 13 40 800
70 % 13 40 840
50 % 13 41 843
40 % 14 48 655
30 % 14 48 655
Entity #2 | Chains: B,E
Caspase-3 subunit p12 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 36 580
95 % 13 39 763
90 % 13 42 677
70 % 13 42 716
50 % 14 65 353
40 % 14 66 378
30 % 16 82 286
Entity #3 | Chains: C,F
Caspase Inhibitor AC-DEVD-CHO protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.