Sequence Similarity Clusters for the Entities in PDB 4DCJ

Entity #1 | Chains: A,D
Caspase-3 subunit p17 protein, length: 147 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 1 1 38924
95 % 13 40 749
90 % 13 40 790
70 % 13 40 831
50 % 13 41 835
40 % 14 48 649
30 % 14 48 646
Entity #2 | Chains: B,E
Caspase-3 subunit p12 protein, length: 108 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name
100 % 12 35 634
95 % 13 38 837
90 % 13 41 749
70 % 13 41 790
50 % 14 63 368
40 % 14 64 392
30 % 16 80 290
Entity #3 | Chains: C,F
Caspase Inhibitor AC-DEVD-CHO protein, length: 5 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.