Sequence Similarity Clusters for the Entities in PDB 4DBQ

Entity #1 | Chains: A
Myosin-VI protein, length: 788 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50742
95 % 15 21 1602 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.4
PDBFlex
90 % 15 21 1633
70 % 15 21 1652
50 % 15 21 1689
40 % 15 21 1704
30 % 52 130 218
Entity #2 | Chains: B
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 2962
95 % 76 173 87 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 89 186 87
70 % 90 188 103
50 % 104 221 113
40 % 121 344 38
30 % 130 371 53

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures