Sequence Similarity Clusters for the Entities in PDB 4DBQ

Entity #1 | Chains: A
Myosin-VI protein, length: 788 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 50032
95 % 15 19 2720 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.4
PDBFlex
90 % 15 19 2766
70 % 15 19 2744
50 % 15 19 2707
40 % 15 19 2666
30 % 52 126 239
Entity #2 | Chains: B
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 2901
95 % 73 169 93 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 86 182 85
70 % 87 184 100
50 % 101 217 114
40 % 118 340 39
30 % 127 367 51

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.