Sequence Similarity Clusters for the Entities in PDB 4DBQ

Entity #1 | Chains: A
Myosin-VI protein, length: 788 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 48675
95 % 15 19 2634 Flexibility: Medium
Max RMSD: 9.0, Avg RMSD: 5.0
PDBFlex
90 % 15 19 2679
70 % 15 19 2659
50 % 15 19 2630
40 % 15 19 2593
30 % 51 124 234
Entity #2 | Chains: B
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 2800
95 % 72 165 93 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 85 178 81
70 % 86 180 98
50 % 100 213 112
40 % 117 336 33
30 % 126 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.