Sequence Similarity Clusters for the Entities in PDB 4DBQ

Entity #1 | Chains: A
Myosin-VI protein, length: 788 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 1 1 51687
95 % 15 21 1638 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.4
PDBFlex
90 % 15 21 1668
70 % 15 21 1695
50 % 15 21 1731
40 % 15 21 1744
30 % 52 134 221
Entity #2 | Chains: B
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 6 13 3028
95 % 81 186 82 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.6
PDBFlex
90 % 94 199 81
70 % 95 201 96
50 % 109 234 106
40 % 126 357 41
30 % 135 384 50

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.

You can also use the structure comparison tool to compare any 2 given structures