Sequence Similarity Clusters for the Entities in PDB 4DBP

Entity #1 | Chains: A
Myosin-VI protein, length: 814 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 30410
95 % 7 19 2692 Flexibility: Medium
Max RMSD: 9.1, Avg RMSD: 5.2
PDBFlex
90 % 7 19 2736
70 % 7 19 2716
50 % 7 19 2685
40 % 7 19 2647
30 % 24 126 238
Entity #2 | Chains: C
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 13 2866
95 % 46 168 91 Flexibility: Medium
Max RMSD: 20.3, Avg RMSD: 9.8
PDBFlex
90 % 57 181 83
70 % 58 183 100
50 % 66 216 115
40 % 73 339 39
30 % 77 366 49

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.