Sequence Similarity Clusters for the Entities in PDB 4DBP

Entity #1 | Chains: A
Myosin-VI protein, length: 814 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 2 29856
95 % 7 19 2659 Flexibility: Medium
Max RMSD: 9.0, Avg RMSD: 5.0
PDBFlex
90 % 7 19 2703
70 % 7 19 2683
50 % 7 19 2653
40 % 7 19 2613
30 % 24 126 234
Entity #2 | Chains: C
Calmodulin protein, length: 149 (BLAST)
Sequence Similarity Cutoff Rank Chains in Cluster Cluster ID / Name Structural variation in cluster
100 % 2 13 2827
95 % 45 165 93 Flexibility: Medium
Max RMSD: 18.8, Avg RMSD: 9.7
PDBFlex
90 % 56 178 82
70 % 57 180 98
50 % 65 213 112
40 % 72 336 34
30 % 76 363 47

Instructions

In the table for each entity, view a list of similar sequences by selecting the link associated with the percentage cutoff.



View more detailed documentation on the redundancy reduction and sequence clustering procedure used by RCSB PDB.